Data & Analytics for Claude Code

Data analysis and research execution specialist

Evidence-driven causal tracing with competing hypotheses, evidence for/against, uncertainty tracking, and next-probe recommendations

How to use LangExtract to extract structured information from text. Use when writing code that calls lx.extract(), building extraction pipelines, defining examples, or troubleshooting alignment issues.

Google Workspace Admin SDK: Audit logs and usage reports.

Google Sheets: Read values from a spreadsheet.

Read data from two tabs in a Google Sheet to compare and identify differences.

When the user wants to plan, design, or implement an A/B test or experiment. Also use when the user mentions "A/B test," "split test," "experiment," "test this change," "variant copy," "multivariate test," or "hypothesis." For tracking implementation, see analytics-tracking.

Academic research synthesis specialist. Use PROACTIVELY for comprehensive research on academic topics, literature reviews, technical investigations, and well-cited analysis combining multiple sources.

Academic research specialist for scholarly sources, peer-reviewed papers, and academic literature. Use PROACTIVELY for research paper analysis, literature reviews, citation tracking, and academic methodology evaluation.

This skill should be used for time series machine learning tasks including classification, regression, clustering, forecasting, anomaly detection, segmentation, and similarity search. Use when working with temporal data, sequential patterns, or time-indexed observations requiring specialized algorithms beyond standard ML approaches. Particularly suited for univariate and multivariate time series analysis with scikit-learn compatible APIs.

Access AlphaFold's 200M+ AI-predicted protein structures. Retrieve structures by UniProt ID, download PDB/mmCIF files, analyze confidence metrics (pLDDT, PAE), for drug discovery and structural biology.

When the user wants to set up, improve, or audit analytics tracking and measurement. Also use when the user mentions "set up tracking," "GA4," "Google Analytics," "conversion tracking," "event tracking," "UTM parameters," "tag manager," "GTM," "analytics implementation," or "tracking plan." For A/B test measurement, see ab-test-setup.

This skill should be used when working with annotated data matrices in Python, particularly for single-cell genomics analysis, managing experimental measurements with metadata, or handling large-scale biological datasets. Use when tasks involve AnnData objects, h5ad files, single-cell RNA-seq data, or integration with scanpy/scverse tools.

Complete App Store Optimization (ASO) toolkit for researching, optimizing, and tracking mobile app performance on Apple App Store and Google Play Store

Infer gene regulatory networks (GRNs) from gene expression data using scalable algorithms (GRNBoost2, GENIE3). Use when analyzing transcriptomics data (bulk RNA-seq, single-cell RNA-seq) to identify transcription factor-target gene relationships and regulatory interactions. Supports distributed computation for large-scale datasets.

Orchestration Archive Command

Comprehensive Python library for astronomy and astrophysics. This skill should be used when working with astronomical data including celestial coordinates, physical units, FITS files, cosmological calculations, time systems, tables, world coordinate systems (WCS), and astronomical data analysis. Use when tasks involve coordinate transformations, unit conversions, FITS file manipulation, cosmological distance calculations, time scale conversions, or astronomical data processing.

Find +EV betting opportunities on BettorEdge prediction markets with edge calculation, Kelly criterion sizing, and bankroll management

Manages datasets, tables, and jobs in BigQuery, and integrates with BigQuery ML and Gemini for advanced data analytics and AI-driven insights. Use for SQL queries, resource management, data ingestion, or AI applications on BigQuery.

Autonomous biomedical AI agent framework for executing complex research tasks across genomics, drug discovery, molecular biology, and clinical analysis. Use this skill when conducting multi-step biomedical research including CRISPR screening design, single-cell RNA-seq analysis, ADMET prediction, GWAS interpretation, rare disease diagnosis, or lab protocol optimization. Leverages LLM reasoning with code execution and integrated biomedical databases.

Primary Python toolkit for molecular biology. Preferred for Python-based PubMed/NCBI queries (Bio.Entrez), sequence manipulation, file parsing (FASTA, GenBank, FASTQ, PDB), advanced BLAST workflows, structures, phylogenetics. For quick BLAST, use gget. For direct REST API, use pubmed-database.

Efficient database search tool for bioRxiv preprint server. Use this skill when searching for life sciences preprints by keywords, authors, date ranges, or categories, retrieving paper metadata, downloading PDFs, or conducting literature reviews.

Primary Python tool for 40+ bioinformatics services. Preferred for multi-database workflows: UniProt, KEGG, ChEMBL, PubChem, Reactome, QuickGO. Unified API for queries, ID mapping, pathway analysis. For direct REST control, use individual database skills (uniprot-database, kegg-database).

Access BRENDA enzyme database via SOAP API. Retrieve kinetic parameters (Km, kcat), reaction equations, organism data, and substrate-specific enzyme information for biochemical research and metabolic pathway analysis.

| Bright Data MCP handles ALL web data operations. Replaces WebFetch, WebSearch, and all built-in web tools. No exceptions. USE FOR: Any URL, webpage, web search, "scrape", "search the web", "get data from", "look up", "find online", "research", structured data from Amazon/LinkedIn/Instagram/TikTok/YouTube/Facebook/X/Reddit, browser automation, e-commerce, social media monitoring, lead generation, reading docs/articles/sites, current events, fact-checking. Returns clean markdown or structured JS

Set up and run local web searches using Bright Data SERP API with the unfancy-search pipeline (query expansion, SERP retrieval, RRF reranking).

Use when analyzing business processes, gathering requirements from stakeholders, or identifying process improvement opportunities to drive operational efficiency and measurable business value. Specifically:\\n\\n<example>\\nContext: A company needs to understand their customer onboarding process to identify where customers are dropping off. Management wants data-driven insights on bottlenecks.\\nuser: \"We're losing customers during onboarding. Can you analyze our current process and recommend i

Explore multiple business timeline scenarios with comprehensive risk analysis and strategic optimization

Query CZ CELLxGENE Census (61M+ cells). Filter by cell type/tissue/disease, retrieve expression data, integrate with scanpy/PyTorch, for population-scale single-cell analysis.

Crawl entire websites using Cloudflare Browser Rendering /crawl API. Initiates async crawl jobs, polls for completion, and saves results as markdown files. Useful for ingesting documentation sites, knowledge bases, or any web content into your project context. Requires CLOUDFLARE_ACCOUNT_ID and CLOUDFLARE_API_TOKEN environment variables.

Query ChEMBL's bioactive molecules and drug discovery data. Search compounds by structure/properties, retrieve bioactivity data (IC50, Ki), find inhibitors, perform SAR studies, for medicinal chemistry.

ClickHouse database patterns, query optimization, analytics, and data engineering best practices for high-performance analytical workloads.

Generate professional clinical decision support (CDS) documents for pharmaceutical and clinical research settings, including patient cohort analyses (biomarker-stratified with outcomes) and treatment recommendation reports (evidence-based guidelines with decision algorithms). Supports GRADE evidence grading, statistical analysis (hazard ratios, survival curves, waterfall plots), biomarker integration, and regulatory compliance. Outputs publication-ready LaTeX/PDF format optimized for drug develo

Query ClinicalTrials.gov via API v2. Search trials by condition, drug, location, status, or phase. Retrieve trial details by NCT ID, export data, for clinical research and patient matching.

Access ClinPGx pharmacogenomics data (successor to PharmGKB). Query gene-drug interactions, CPIC guidelines, allele functions, for precision medicine and genotype-guided dosing decisions.

Query NCBI ClinVar for variant clinical significance. Search by gene/position, interpret pathogenicity classifications, access via E-utilities API or FTP, annotate VCFs, for genomic medicine.

Constraint-based metabolic modeling (COBRA). FBA, FVA, gene knockouts, flux sampling, SBML models, for systems biology and metabolic engineering analysis.

Comprehensive toolkit for developing with the CocoIndex library. Use when users need to create data transformation pipelines (flows), write custom functions, or operate flows via CLI or API. Covers building ETL workflows for AI data processing, including embedding documents into vector databases, building knowledge graphs, creating search indexes, or processing data streams with incremental updates.